Staff information

Lee Ann McCue

Scientist
Pacific Northwest National Laboratory
PO Box 999
MSIN: J4-33
Richland, WA 99352
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Cannon WR, BJM Webb-Robertson, AR Willse, M Singhal, LA McCue, JE McDermott, RC Taylor, KM Waters, and CS Oehmen. 2009. "An Integrative Computational Framework for Hypotheses-Driven Systems Biology Research in Proteomics and Genomics." Chapter 4 in Computational and Systems Biology: Methods and Applications, pp. 63-85. Research Signpost, Trivandrum, India.
Konstantinidis K, MH Serres, MF Romine, JLM Rodrigues, JM Auchutung, LA McCue, MS Lipton, A Obraztsova, CS Giometti, KH Nealson, JK Fredrickson, and JM Tiedje. 2009. "Comparative systems biology across an evolutionary gradient within the Shewanella genus ." Proceedings of the National Academy of Sciences of the United States of America 106(37):15909-15914. doi:10.1073/pnas.0902000106
Webb-Robertson BJM, LA McCue, N Beagley, JE McDermott, DS Wunschel, SM Varnum, JZ Hu, NG Isern, GW Buchko, K Mcateer, JG Pounds, SJ Skerret, D Liggitt, and CW Frevert. 2009. "A Bayesian Integration Model of High-Throughput Proteomics and Metabolomics Data for Improved Early Detection of Microbial Infections." In Pacific Symposium on Biocomputing, vol. 14, pp. 451-463. World Scientific Publishing Co., Singapore, Singapore.

Webb-Robertson BJM, LA McCue, and CE Lawrence. 2008. "Measuring Global Credibility with Application to Local Sequence Alignment." PLoS Computational Biology 4(5):Art. No e1000077. doi:10.1371/journal.pcbi.1000077
Callister SJ, LA McCue, JE Turse, ME Monroe, KJ Auberry, RD Smith, JN Adkins, and MS Lipton. 2008. "Comparative Bacterial Proteomics: Analysis of the Core Genome Concept." PLoS One 3(2):e1542. doi:10.1371/journal.pone.0001542
Romine MF, T Carlson, AD Norbeck, LA McCue, and MS Lipton. 2008. "Identification of Mobile Elements and Pseudogenes in the Shewanella oneidensis MR-1 Genome." Applied and Environmental Microbiology 74(10):3257-3265.

Driscoll ME, MF Romine, FS Juhn, MH Serres, LA McCue, AS Beliaev, JK Fredrickson, and TS Gardner. 2007. "Identification of diverse carbon utilization pathways in Shewanella oneidensis MR-1 via expression profiling." Genome Informatics 18:287-298.
Newberg LA, WA Thompson, S Conlan, TM Smith, LA McCue, and CE Lawrence. 2007. "A phylogenetic Gibbs sampler that yields centroid solutions of cis-regulatory sites." Bioinformatics 23(14):1718-1727.
Thompson W, S Conlan, LA McCue, and C Lawrence. 2007. "Using the Gibbs Motif Sampler for Phylogenetic Footprinting." Chapter 25 in Methods in Molecular Biology: Comparative Genomics, vol. 1, ed. Nicholas H. Bergman. Humana Press, Totowa, NJ.
Thompson WA, LA Newberg, S Conlan, LA McCue, and CE Lawrence. 2007. "The Gibbs Centroid Sampler." Nucleic Acids Research 35(Suppl. 2):W232-W237. doi:10.1093/nar/gkm265

Conlan S, and LA McCue. 2006. "Software to perform automated comparisons of pairwise percent identities for microbial species." BioTechniques 40(5):578-582.