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Staff information

Bruce Palmer

High Performance Computing
Scientist
Pacific Northwest National Laboratory
PO Box 999
MSIN: K7-90
Richland, WA 99352

PNNL Publications

2008

  • Kathmann SM, BJ Palmer, GK Schenter, and BC Garrett. 2008. "Activation Energies and Potentials of Mean Force for Water Cluster Evaporation." Journal of Chemical Physics 128(6):Art. No. 064306.  doi:10.1063/1.2837282
  • Scheibe TD, AM Tartakovsky, DM Tartakovsky, GD Redden, P Meakin, BJ Palmer, and KL Schuchardt. 2008. "Hybrid numerical methods for multiscale simulations of subsurface biogeochemical processes." In Proceedings of SciDAC 2008: Journal of Physics, vol. 125, p. 012054.  IOP Publishers, Bristol, United Kingdom.  doi:10.1088/1742-6596/125/1/012054

2007

  • Palmer BJ, SM Kathmann, MK Krishnan, V Tipparaju, and J Nieplocha. 2007. "The Use of Processor Groups in Molecular Dynamics Simulations to Sample Free-Energy States." Journal of Chemical Theory and Computation 3(2):583-592.  doi:10.1021/ct600260u
  • Palmer BJ, Y Fang, GE Hammond, and V Gurumoorthi. 2007. "Component-Based Framework for Subsurface Simulations." In SciDAC 2007. Published in Journal of Physics: Conference Series, vol. 78, p. 012056 (5 pages).  IOP Publishing, Bristol, United Kingdom.  doi:10.1088/1742-6596/78/1/012056
  • Schuchardt KL, BJ Palmer, J Daily, TO Elsethagen, and AS Koontz. 2007. "IO strategies and data services for petascale data sets from a global cloud resolving model." Journal of Physics: Conference Series 78:Art. No. 012089.  doi:10.1088/1742-6596/78/1/012089

2006

  • Nieplocha J, BJ Palmer, V Tipparaju, MK Krishnan, HE Trease, and E Apra. 2006. "Advances, Applications and Performance of the Global Arrays Shared Memory Programming Toolkit." International Journal of High Performance Computing Applications 20(2):203-231. 
  • Wang W, LQ Wang, BJ Palmer, GJ Exarhos, and AD Li. 2006. "Cyclization and Catenation Directed by Molecular Self-Assembly." Journal of the American Chemical Society 128(34):11150-11159. 

2005

  • Gdanitz J, GD Black, CS Lansing, BJ Palmer, and EF Schuchart. 2005. " Registering the Amica Electronic Structure Code in the Extensible Computational Chemistry Environment." Journal of Computational Chemistry 26(3):214-225. 
  • Nieplocha J, MK Krishnan, BJ Palmer, V Tipparaju, and Y Zhang. 2005. "Exploiting Processor Groups to Extend Scalability of the GA Shared Memory Programming Model." In Proceedings of the 2nd Conference on Computing Frontiers, May 4-6, Ischia, Italy, pp. 262 - 272.  Association for Computing Machinery, New York, NY.  doi:10.1145/1062261.1062305

2004

  • Palmer BJ, and DR Rector. 2004. "Erratum: Lattice-Boltzmann algorithm for simulating thermal two-phase flow [ Phys. Rev. E 61, 5295 (2000) ]." Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics 69(4):Article no: 049903 .  doi:10.1103/PhysRevE.69.049903

2003

  • Black GD, KL Schuchardt, DK Gracio, and BJ Palmer. 2003. "The Extensible Computational Chemistry Environment: A Problem Solving Environment for High Performance Theoretical Chemistry." In 3rd International Conference on Computational Science - ICCS 2003, Saint Petersburg, Russian Federation and Melbourne, Australia; Lecture notes in computer science, vol. 2660, ed. Sloot, P. , pp. 122-131.  Springer, Berlin, Germany. 

2002

2001

  • Yonker CR, and BJ Palmer. 2001. "Investigation of CO2-Fluorine Interactions through the Intermolecular Effects on theH-1and F-19 Shielding of CH3F and CHF3 at Various Temperatures and Pressures." Journal of Physical Chemistry A 105(2):308-314. 

2000

  • Palmer BJ, and DR Rector. 2000. "Lattice Boltzmann Algorithm for Simulating Thermal Flow in Compressible Fluids." Journal of Computational Physics 161(1):1-20. 
  • Palmer BJ, and DR Rector. 2000. "Lattice-Boltzmann Algorithm for Simulating Thermal Two-Phase Flow." Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics 61(5):5295-5306. 
  • Fulton JL, MM Hoffmann, JG Darab, BJ Palmer, and EA Stern. 2000. "Copper(I) and Copper(II) Coordination Structure under Hydrothermal Conditions at 325 degrees C: An X-ray Absorption Fine Structure and Molecular Dynamics Study." Journal of Physical Chemistry A 104(49):11651-11663. 

1999

  • Palmer BJ, J Liu, and JW Virden. 1999. "Simulations of the Effect of Diblock Surfactant Spacer Molecules on Micelle Structure and Function." Langmuir 15(22):7426-7431. 
  • Hoffmann MM, JG Darab, BJ Palmer, and JL Fulton. 1999. "A Transition in the Ni2+ Complex Structure from Six-to Four- Coordinate upon Formation of Ion Pair Species in Supercritical Water: An X-ray Absorption Fine Structure, Near-infrared, and Molecular Dynamics Study." Journal of Physical Chemistry A 103(42):8471-8482. 

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