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ACMD Division

Staff information

Abhinav Vishnu

High Performance Computing
Scientist
Pacific Northwest National Laboratory
PO Box 999
MSIN: J4-30
Richland, WA 99352
509/372-4794

PNNL Publications

2016

  • Hameed A, A Khoshkbarforoushha, R Ranjan, PP Jayaraman, J Kolodziej, P Balaji, S Zeadally, QM Malluhi, N Tziritas, A Vishnu, SU Khan, and A Zomaya. 2016. "A survey and taxonomy on energy efficient resource allocation techniques for cloud computing systems." Computing 98(7):751--774.  doi:10.1007/s00607-014-0407-8
  • Malik S, SU Khan, SJ Ewen, N Tziritas, J Kolodziej, A Zomaya, SA Madani, N Min-Allah, L Wang, CZ Xu, QM Malluhi, J Pecero, P Balaji, A Vishnu, R Ranjan, S Zeadally, and H Li. 2016. "Performance analysis of data intensive cloud systems based on data management and replication: a survey." Distributed and Parallel Databases 34(2):179-215.  doi:10.1007/s10619-015-7173-2

2015

  • Vishnu A, J Narasimhan, L Holder, DJ Kerbyson, and A Hoisie. 2015. "Fast and Accurate Support Vector Machines on Large Scale Systems." In IEEE International Conference on Cluster Computing (CLUSTER 2015), September 8-11, 2015, Chicago, Illinois, pp. 110-119.  IEEE, Piscataway, NJ.  doi:10.1109/CLUSTER.2015.26
  • Chavarría-Miranda D, M Halappanavar, S Krishnamoorthy, JB Manzano Franco, A Vishnu, and A Hoisie. 2015. "On the Impact of Execution Models: A Case Study in Computational Chemistry." In Joint International Workshop on High-level Parallel Programming Models and Supportive Environments (HIPS) and Large-Scale Parallel Processing (LSPP), held in conjunction with the 29th IEEE International Parallel & Distributed Processing Symposium Workshop (IPDPSW 2015), May 25-29, 2015, Hyderabad, India, pp. 255-264.  IEEE, Piscataway, NJ.  doi:10.1109/IPDPSW.2015.111
  • Daily JA, A Kalyanaraman, S Krishnamoorthy, and A Vishnu. 2015. "A Work Stealing Based Approach for Enabling Scalable Optimal Sequence Homology Detection." Journal of Parallel and Distributed Computing 79-80:132-142.  doi:10.1016/j.jpdc.2014.08.009
  • Krishnamoorthy S, JA Daily, A Vishnu, and BJ Palmer. 2015. "Global Arrays." Chapter 5 in Programming Models for Parallel Computing, pp. 113-128.  MIT Press, Cambridge, MA. 
  • Lin J, K Hamidouche, J Zheng, X Lu, A Vishnu, and D Panda. 2015. "Accelerating k-NN Algorithm with Hybrid MPI and OpenSHMEM." In OpenSHMEM 2015: Second Workshop on OpenSHMEM and Related Technologies, August 4-6, 2015, Annapolis, Maryland, ed. G Venkata, et al, pp. 164-177.  Springer, Berlin, Germany.  doi:10.1007/978-3-319-26428-8
  • Tallent NR, A Vishnu, H van Dam, JA Daily, DJ Kerbyson, and A Hoisie. 2015. "Diagnosing the Causes and Severity of One-sided Message Contention." In 20th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPoPP '15), February 7-11, 2015, San Francisco, California, pp. 130-139.  Association for Computing Machinery, New York, NY.  doi:10.1145/2688500.2688516
  • Venkatesh A, A Vishnu, K Hamidouche, NR Tallent, D Panda, DJ Kerbyson, and A Hoisie. 2015. "A Case for Application Oblivious Energy-Efficient MPI Runtime." In SC15 Proceedings: International Conference on High Performance Computing, Networking, Storage and Analysis, November 15-20, 2015, Austin, Texas, p. Paper No. 29.  Association of Computing Machinery (ACM), New York, NY.  doi:10.1145/2807591.2807658
  • Vishnu A, and K Agarwal. 2015. "Large Scale Frequent Pattern Mining using MPI One-Sided Model." In IEEE International Conference on Cluster Computing (CLUSTER 2015), September 8-11, 2015, Chicago, Illinois, pp. 138-147.  IEEE, Piscataway, NJ.  doi:10.1109/CLUSTER.2015.30

2014

  • Chavarría-Miranda D, JB Manzano Franco, S Krishnamoorthy, A Vishnu, KJ Barker, and A Hoisie. 2014. "SCaLeM: A Framework for Characterizing and Analyzing Execution Models." In Beowulf 2014: Proceedings of the 20 Years of Beowulf Workshop on Honor of Thomas Sterling's 65th Birthday, October 13-14, 2014, Annapolis, Maryland, pp. 34-43.  ACM, New York, NY.  doi:10.1145/2737909.2737910
  • Daily JA, A Vishnu, BJ Palmer, HJJ van Dam, and DJ Kerbyson. 2014. "On the Suitability of MPI as a PGAS Runtime." In 21st International Conference on High Performance Computing, (HiPC 2014), December 17-20, 2014, Dona Paula, India, pp. 1-10.  IEEE, Piscataway, NJ.  doi:10.1109/HiPC.2014.7116712
  • Kerbyson DJ, KJ Barker, A Vishnu, and A Hoisie. 2014. "A performance comparison of current HPC systems: Blue Gene/Q, Cray XE6 and InfiniBand systems." Future Generation Computer Systems 30:291-304.  doi:10.1016/j.future.2013.06.019

2013

  • Vishnu A, DJ Kerbyson, KJ Barker, and H van Dam. 2013. "Building Scalable PGAS Communication Subsystem on Blue Gene/Q." In IEEE 27th Parallel and Distributed Processing Symposium Workshop & PhD Forum (IPDPSW 2013), May 20-24, 2013, Cambridge, Massachusetts, pp. 825-833.  IEEE, Piscataway, NJ.  doi:10.1109/IPDPSW.2013.262
  • Vishnu A, S Song, A Marquez, KJ Barker, DJ Kerbyson, K Cameron, and P Balaji. 2013. "Designing Energy Efficient Communication Runtime Systems: A View from PGAS Models." Journal of Supercomputing 63(3):691-709 .  doi:10.1007/s11227-011-0699-9
  • Hussain H, S Malik, A Hameed, SU Khan, G Bickler, N Min-Allah, M Qureshi, L Zhang, Y Wang, N Ghani, J Kolodziej, A Zomaya, CZ Xu, P Balaji, A Vishnu, F Pinel, J Pecero, D kliazovich, P Bouvry, H Li, L Wang, D Chen, and A Rayes. 2013. " A survey on resource allocation in high performance distributed computing systems." Parallel Computing 39(11):709-736.  doi:10.1016/j.parco.2013.09.009
  • Kerbyson DJ, KJ Barker, A Vishnu, and A Hoisie. 2013. "Comparing the Performance of Blue Gene/Q with Leading Cray XE6 and InfiniBand Systems." In Proceedings of 18th IEEE International Conference on Parallel and Distributed Systems (ICPADS), December 17-19, 2012, Singapore, pp. 556-563.  IEEE Computer Society, Los Alamitos, CA.  doi:10.1109/ICPADS.2012.81
  • Song S, NR Tallent, and A Vishnu. 2013. "Exploring Machine Learning Techniques For Dynamic Modeling on Future Exascale Systems." In Modeling & Simulation of Exascale Systems & Applications: Workshop on Modeling & Simulation of Exascale Systems & Applications, September 18-19, 2013, Seattle, Washington.  US Department of Energy, Office of Advanced Scientific Computing Research, Washington DC. 
  • Valentini G, W Lassonde, SU Khan, N Min-Allah, S Madani, J Li, L Zhang, L Wang, N Ghani, J Kolodziej, H Li, A Zomaya, CZ Xu, P Balaji, A Vishnu, F Pinel, J Pecero, D Kliazovich, and P Bouvry. 2013. " An overview of energy efficiency techniques in cluster computing systems." Cluster Computing 16(1):3-15.  doi:10.1007/s10586-011-0171-x
  • van Dam HJJ, A Vishnu, and WA De Jong. 2013. "A Case for Soft Error Detection and Correction in Computational Chemistry." Journal of Chemical Theory and Computation 9(9):3995-4005.  doi:10.1021/ct400489c

2012

  • Vishnu A, JA Daily, and BJ Palmer. 2012. "Designing Scalable PGAS Communication Subsystems on Cray Gemini Interconnect." In 19th International Conference on High Performance Computing (HiPC), December 18-22, 2012, Pune, India.  Institute of Electrical and Electronics Engineers , Piscataway, NJ.  doi:10.1109/HiPC.2012.6507506
  • Chavarría-Miranda D, S Krishnamoorthy, and A Vishnu. 2012. "Global Futures: a multithreaded execution model for Global Arrays-based applications." In Proceedings of the 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2012), May 13-16, 2012, Ottawa, Canada, pp. 393-401.  Institute of Electrical and Electronics Engineers , Piscataway, NJ.  doi:10.1109/CCGrid.2012.105

2011

  • Vishnu A, M ten Bruggencate, and RM Olson. 2011. "Evaluating the Potential of Cray Gemini Interconnect for PGAS Communication Runtime Systems." In IEEE 19th Annual Symposium on High Performance Interconnects (HOT 2011), August 24-26, 2011, Santa Clara, California, pp. 70-77.  IEEE, Piscataway, NJ.  doi:10.1109/HOTI.2011.19
  • Vishnu A, MK Krishnan, and P Balaji. 2011. "Dynamic Time-Variant Connection Management for PGAS Models on InfiniBand." In Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum (IPDPSW 2011), May 16-20, 2011, Anchorage, Alaska, pp. 740 - 746.  IEEE Computer Society, Los Alamitos, CA. 
  • Kerbyson DJ, A Vishnu, KJ Barker, and A Hoisie. 2011. "Codesign Challenges for Exascale Systems: Performance, Power and Reliability." Computer 44(11):37-43.  doi:10.1109/MC.2011.298
  • Song S, C Si Yu, R Ge, A Vishnu, and K Cameron. 2011. "Iso-Energy-Efficiency: An Approach to Power Constrained Parallel Computation." In IEEE International Parallel & Distributed Processing Symposium (IPDPS 2011), May 16-20, 2011, Anchorage, Alaska, pp. 128-139.  IEEE, Piscataway, NJ.  doi:10.1109/IPDPS.2011.22
  • van Dam HJJ, A Vishnu, and WA De Jong. 2011. "Designing a Scalable Fault Tolerance Model for High Performance Computational Chemistry: A Case Study with Coupled Cluster Perturbative Triples." Journal of Chemical Theory and Computation 7(1):66-75.  doi:10.1021/ct100439u

2010

  • Vishnu A, and MK Krishnan. 2010. "Efficient On-demand Connection Management Mechanisms with PGAS Models on InfiniBand." In 10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing (CCGrid 2010), pp. 175-184.  Institute of Electrical and Electronics Engineers, Piscataway, NJ.  doi:10.1109/CCGRID.2010.58
  • Vishnu A, HJJ van Dam, WA De Jong, P Balaji, and S Song. 2010. "Fault Tolerant Communication Runtime Support for Data-Centric Programming Models." In International Conference on High Performance Computing (HiPC 2010), December 19-22, 2010, Goa, India.  International Electrical and Electronics Engineers, Piscataway, NJ.  doi:10.1109/HIPC.2010.5713195
  • Vishnu A, S Song, A Marquez, KJ Barker, DJ Kerbyson, K Cameron, and P Balaji. 2010. "Designing Energy Efficient Communication Runtime Systems for Data Centric Programming Models." In IEEE/ACM Internationall Conference on Green Computing and Communications (GreenCom 2010) and the International Conference on Cyber, Physical and Social Computing (CPSCom 2010), December 18-20, 2010, Hangzhou, China, ed. P Zhu, et al, pp. 229-236.  Institute of Electrical and Electronics Engineers, Inc., Piscatawy, NJ.  doi:10.1109/GreenCom-CPSCom.2010.133
  • Kandalla K, H Subramoni, A Vishnu, and DK Panda. 2010. "Designing Topology-Aware Collective Communication Algorithms for Large Scale InfiniBand Clusters: Case Studies with Scatter and Gather." In IEEE International Symposium on Parallel & Distributed Processing, Workshops and Phd Forum (IPDPSW 2010).  Institute of Electrical and Electronics Engineers, Piscataway, NJ.  doi:10.1109/IPDPSW.2010.5470853
  • Krishnan MK, RR Lewis, and A Vishnu. 2010. "Scaling Linear Algebra Kernels using Remote Memory Access." In Proceedings of the 39th International Conference on Parallel Processing Workshops (ICPPW), pp. 369-376.  IEEE Computer Society, Los Alamitos, CA.  doi:10.1109/ICPPW.2010.57

2009

  • Vishnu A, MJ Koop, A Moody, A Mamidala, S Narravula, and DK Panda. 2009. "Topolgy Agnostic Hot-Spot Avoidance with InfiniBand." Concurrency and Computation. Practice & Experience 21(3):301-319.  doi:10.1002/cpe.1359
  • Vishnu A, MK Krishnan, and DK Panda. 2009. "An Efficient Hardware-Software Approach to Network Fault Tolerance with InfiniBand." In IEEE International Conference on Cluster Computing and Workshops (CLUSTER 2009).  Institute of Electrical and Electronics Engineers, Piscataway, NJ.  doi:10.1109/CLUSTR.2009.5289168

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